| Annotations
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This section contains tools and links related to genome annotation.
Different sites provide automated and curated annotations. See also DNA:Gene
Prediction, DNA: Sequence Features.
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| Gene Prediction
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This section includes links to gene prediction programs for both eukaryotic and
prokaryotic organisms. Resources that evaluate the available gene predicting
programs are also included.
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| Mapping and Assembly
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This section contains links to mapping data, contig assembly, and genome
resources used by many genome sequencing projects.
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| Phylogeny Reconstruction
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This section contains links to tools and databases for phylogeny reconstruction,
including taxonomy resources.
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| Sequence Feature Detection
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This section contains links to tools for finding regulatory sequences, the base
composition, binding sites and motifs in your sequence of interest.
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| Sequence Polymorphisms(17)
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Links to various sequence polymorphism databases and resources concerning SNPs,
short deletion, and insertion polymorphisms.
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Tools For the Bench
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These links contain programs which can create restriction enzyme maps for your sequence of interest.
Also included are tools for the design of oligonucleotide probes and PCR primers.
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Utilities
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These resources are free, publicly available, multi-purpose tools for DNA sequence analysis. Links to resources
for sequence presentation, manipulation tasks, and format conversion are found here.
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